Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 KRT16P2-201ENST00000414673 1423 ntBASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 AC120498.10-201ENST00000621827 505 ntBASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA4Q9Y5G9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 CYP2T1P-201ENST00000432607 1285 ntBASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA4Q9Y5G9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 MKRN4P-201ENST00000444706 1521 ntBASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 PRORSD1P-201ENST00000295112 541 ntBASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 MIPEPP3-201ENST00000412105 444 ntBASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 AL589935.2-201ENST00000616471 1231 ntBASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 LETM1P2-201ENST00000597330 2178 ntBASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA4Q9Y5G9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 SLC7A5P1-201ENST00000568957 537 ntBASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGA4Q9Y5G9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 TERF1P5-201ENST00000477545 1207 ntBASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA4Q9Y5G9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA4Q9Y5G9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA4Q9Y5G9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHGA4Q9Y5G9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
PCDHGA4Q9Y5G9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.79
PCDHGA4Q9Y5G9 AC068338.2-201ENST00000563278 1430 ntBASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms