Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 AL512625.2-201ENST00000417533 625 ntBASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 PGM5P4-201ENST00000421970 445 ntBASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 AC133552.2-202ENST00000575694 574 ntBASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB13Q9Y5F0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 CROCCP5-201ENST00000436658 830 ntBASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 CYP21A1P-202ENST00000354927 1481 ntBASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHB13Q9Y5F0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 MCRIP2P1-201ENST00000394346 511 ntBASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHB13Q9Y5F0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 MIR663A-201ENST00000385250 93 ntBASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB13Q9Y5F0 AC087633.2-202ENST00000565166 1439 ntBASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 AL121603.2-201ENST00000557373 2117 ntBASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 AL050303.2-201ENST00000619798 666 ntBASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PCDHB13Q9Y5F0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 FEM1AP1-201ENST00000431297 1995 ntBASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.47■■□□□ 1.19
PCDHB13Q9Y5F0 AC006970.2-201ENST00000450065 779 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms