Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 KRT18P48-201ENST00000434763 852 ntBASIC19.3■□□□□ 0.68
LHX6Q9UPM6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 AC091076.1-201ENST00000610741 619 ntBASIC19.3■□□□□ 0.68
LHX6Q9UPM6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LHX6Q9UPM6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 AC104076.2-201ENST00000448912 469 ntBASIC19.29■□□□□ 0.68
LHX6Q9UPM6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LHX6Q9UPM6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 MCRIP2P1-201ENST00000394346 511 ntBASIC19.28■□□□□ 0.68
LHX6Q9UPM6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 WWOX-216ENST00000569818 525 ntBASIC19.28■□□□□ 0.68
LHX6Q9UPM6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.28■□□□□ 0.68
LHX6Q9UPM6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.27■□□□□ 0.68
LHX6Q9UPM6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 AL358472.4-201ENST00000633140 710 ntBASIC19.27■□□□□ 0.68
LHX6Q9UPM6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX6Q9UPM6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LHX6Q9UPM6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LHX6Q9UPM6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LHX6Q9UPM6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.26■□□□□ 0.67
LHX6Q9UPM6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.26■□□□□ 0.67
LHX6Q9UPM6 KRT8P9-201ENST00000558927 1449 ntBASIC19.26■□□□□ 0.67
LHX6Q9UPM6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LHX6Q9UPM6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LHX6Q9UPM6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms