Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COPS3Q9UNS2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 AC092720.2-201ENST00000602388 1665 ntBASIC18.16■□□□□ 0.5
COPS3Q9UNS2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 KRT87P-202ENST00000534226 1464 ntBASIC18.16■□□□□ 0.5
COPS3Q9UNS2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPS3Q9UNS2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 AC079140.4-201ENST00000507448 529 ntBASIC18.15■□□□□ 0.5
COPS3Q9UNS2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.15■□□□□ 0.5
COPS3Q9UNS2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.14■□□□□ 0.5
COPS3Q9UNS2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.14■□□□□ 0.5
COPS3Q9UNS2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
COPS3Q9UNS2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
COPS3Q9UNS2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.14■□□□□ 0.49
COPS3Q9UNS2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 AC138907.5-202ENST00000569484 235 ntBASIC18.13■□□□□ 0.49
COPS3Q9UNS2 AL358852.1-201ENST00000623174 1268 ntBASIC18.13■□□□□ 0.49
COPS3Q9UNS2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.13■□□□□ 0.49
COPS3Q9UNS2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 TCF3P1-201ENST00000423021 1937 ntBASIC18.12■□□□□ 0.49
COPS3Q9UNS2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPS3Q9UNS2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPS3Q9UNS2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms