Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PHTF1Q9UMS5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHTF1Q9UMS5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHTF1Q9UMS5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHTF1Q9UMS5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21■□□□□ 0.95
PHTF1Q9UMS5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PHTF1Q9UMS5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 AC073314.1-201ENST00000568729 2216 ntBASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 AC231657.2-201ENST00000624556 255 ntBASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 AC073111.5-205ENST00000641717 521 ntBASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHTF1Q9UMS5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 AL391422.3-201ENST00000603791 2761 ntBASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 RBM17P2-201ENST00000616397 1405 ntBASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 CDCA4P2-201ENST00000441182 718 ntBASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 AC245052.3-201ENST00000450182 901 ntBASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 RARRES2P11-201ENST00000635158 484 ntBASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHTF1Q9UMS5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PHTF1Q9UMS5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 AC013268.1-206ENST00000638368 961 ntBASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 AC112229.1-201ENST00000639295 961 ntBASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PHTF1Q9UMS5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PHTF1Q9UMS5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PHTF1Q9UMS5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 AC026185.1-201ENST00000445748 174 ntBASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 AC007322.4-201ENST00000509611 723 ntBASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHTF1Q9UMS5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms