Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.53■■□□□ 1.04
AMFRQ9UKV5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AMFRQ9UKV5 AC116050.2-201ENST00000612102 1779 ntBASIC21.53■■□□□ 1.04
AMFRQ9UKV5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AMFRQ9UKV5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
AMFRQ9UKV5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AMFRQ9UKV5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
AMFRQ9UKV5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
AMFRQ9UKV5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AMFRQ9UKV5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
AMFRQ9UKV5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
AMFRQ9UKV5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 TCF3P1-201ENST00000423021 1937 ntBASIC21.51■■□□□ 1.03
AMFRQ9UKV5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 AC010141.2-201ENST00000452426 721 ntBASIC21.51■■□□□ 1.03
AMFRQ9UKV5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.51■■□□□ 1.03
AMFRQ9UKV5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AMFRQ9UKV5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 IRS3P-201ENST00000223076 1006 ntBASIC21.49■■□□□ 1.03
AMFRQ9UKV5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 AC142381.2-201ENST00000566120 298 ntBASIC21.49■■□□□ 1.03
AMFRQ9UKV5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 AL139246.5-201ENST00000606645 996 ntBASIC21.49■■□□□ 1.03
AMFRQ9UKV5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AMFRQ9UKV5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.48■■□□□ 1.03
AMFRQ9UKV5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 SLC7A5P2-201ENST00000553010 536 ntBASIC21.47■■□□□ 1.03
AMFRQ9UKV5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 DUX4L2-201ENST00000561772 1275 ntBASIC21.47■■□□□ 1.03
AMFRQ9UKV5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 DUX4L6-201ENST00000626483 1275 ntBASIC21.47■■□□□ 1.03
AMFRQ9UKV5 DUX4L1-201ENST00000627662 1275 ntBASIC21.47■■□□□ 1.03
AMFRQ9UKV5 DUX4L8-201ENST00000629013 1275 ntBASIC21.47■■□□□ 1.03
AMFRQ9UKV5 DUX4L3-201ENST00000630187 1275 ntBASIC21.47■■□□□ 1.03
AMFRQ9UKV5 DUX4L7-201ENST00000630678 1275 ntBASIC21.47■■□□□ 1.03
AMFRQ9UKV5 DUX4L5-201ENST00000630834 1275 ntBASIC21.47■■□□□ 1.03
AMFRQ9UKV5 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.47■■□□□ 1.03
AMFRQ9UKV5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms