Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
APOBEC3BQ9UH17 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOBEC3BQ9UH17 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 AL356652.1-201ENST00000615962 565 ntBASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
APOBEC3BQ9UH17 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOBEC3BQ9UH17 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 AL359736.2-201ENST00000621992 437 ntBASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
APOBEC3BQ9UH17 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 C1QBPP2-201ENST00000528754 825 ntBASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 FAM197Y4-202ENST00000622692 608 ntBASIC20.02■□□□□ 0.8
APOBEC3BQ9UH17 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms