Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EHD3Q9NZN3 AC027702.1-201ENST00000563810 1770 ntBASIC19.44■□□□□ 0.7
EHD3Q9NZN3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
EHD3Q9NZN3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EHD3Q9NZN3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EHD3Q9NZN3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 LINC01521-201ENST00000504184 1943 ntBASIC19.43■□□□□ 0.7
EHD3Q9NZN3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 AL157384.1-201ENST00000445995 2473 ntBASIC19.43■□□□□ 0.7
EHD3Q9NZN3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EHD3Q9NZN3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.42■□□□□ 0.7
EHD3Q9NZN3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EHD3Q9NZN3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 AP005212.1-201ENST00000581547 1997 ntBASIC19.41■□□□□ 0.7
EHD3Q9NZN3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.41■□□□□ 0.7
EHD3Q9NZN3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EHD3Q9NZN3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 AC007322.3-201ENST00000426526 701 ntBASIC19.4■□□□□ 0.7
EHD3Q9NZN3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 AC137761.2-201ENST00000561729 223 ntBASIC19.4■□□□□ 0.7
EHD3Q9NZN3 AC145350.3-201ENST00000569033 163 ntBASIC19.4■□□□□ 0.7
EHD3Q9NZN3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 AC007952.6-201ENST00000573168 2673 ntBASIC19.4■□□□□ 0.7
EHD3Q9NZN3 AC003957.1-201ENST00000625108 2673 ntBASIC19.4■□□□□ 0.7
EHD3Q9NZN3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EHD3Q9NZN3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms