Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.57■□□□□ 0.4
TREM2Q9NZC2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TREM2Q9NZC2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TREM2Q9NZC2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TREM2Q9NZC2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TREM2Q9NZC2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TREM2Q9NZC2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TREM2Q9NZC2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 AL138781.1-201ENST00000566567 1274 ntBASIC17.56■□□□□ 0.4
TREM2Q9NZC2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.56■□□□□ 0.4
TREM2Q9NZC2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 GUSBP6-202ENST00000438529 1198 ntBASIC17.55■□□□□ 0.4
TREM2Q9NZC2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 AC142086.2-201ENST00000569753 217 ntBASIC17.55■□□□□ 0.4
TREM2Q9NZC2 AC016405.3-201ENST00000607710 860 ntBASIC17.55■□□□□ 0.4
TREM2Q9NZC2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREM2Q9NZC2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 AC133552.2-202ENST00000575694 574 ntBASIC17.54■□□□□ 0.4
TREM2Q9NZC2 AL591742.1-201ENST00000604433 565 ntBASIC17.54■□□□□ 0.4
TREM2Q9NZC2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 AC008694.1-202ENST00000636953 945 ntBASIC17.54■□□□□ 0.4
TREM2Q9NZC2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREM2Q9NZC2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 AC091799.1-201ENST00000422823 811 ntBASIC17.53■□□□□ 0.4
TREM2Q9NZC2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 AC093787.1-201ENST00000450396 207 ntBASIC17.53■□□□□ 0.4
TREM2Q9NZC2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TREM2Q9NZC2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.52■□□□□ 0.4
TREM2Q9NZC2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms