Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.04■□□□□ 0.96
VPS45Q9NRW7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VPS45Q9NRW7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.04■□□□□ 0.96
VPS45Q9NRW7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS45Q9NRW7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.04■□□□□ 0.96
VPS45Q9NRW7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS45Q9NRW7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.04■□□□□ 0.96
VPS45Q9NRW7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS45Q9NRW7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS45Q9NRW7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 AC008550.1-201ENST00000511500 884 ntBASIC21.02■□□□□ 0.96
VPS45Q9NRW7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 AC243732.1-201ENST00000612648 864 ntBASIC21.02■□□□□ 0.96
VPS45Q9NRW7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS45Q9NRW7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VPS45Q9NRW7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 UNC93B5-201ENST00000530315 699 ntBASIC21.01■□□□□ 0.95
VPS45Q9NRW7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 AC121338.2-201ENST00000622535 1744 ntBASIC21.01■□□□□ 0.95
VPS45Q9NRW7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS45Q9NRW7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21■□□□□ 0.95
VPS45Q9NRW7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21■□□□□ 0.95
VPS45Q9NRW7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS45Q9NRW7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21■□□□□ 0.95
VPS45Q9NRW7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21■□□□□ 0.95
VPS45Q9NRW7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21■□□□□ 0.95
VPS45Q9NRW7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21■□□□□ 0.95
VPS45Q9NRW7 UBE2SP1-201ENST00000450587 669 ntBASIC21■□□□□ 0.95
VPS45Q9NRW7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21■□□□□ 0.95
VPS45Q9NRW7 AL162412.1-201ENST00000567129 965 ntBASIC21■□□□□ 0.95
VPS45Q9NRW7 AC073648.6-201ENST00000641589 218 ntBASIC21■□□□□ 0.95
VPS45Q9NRW7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21■□□□□ 0.95
VPS45Q9NRW7 AC010980.2-201ENST00000587099 1412 ntBASIC21■□□□□ 0.95
VPS45Q9NRW7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
VPS45Q9NRW7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21■□□□□ 0.95
VPS45Q9NRW7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VPS45Q9NRW7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS45Q9NRW7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21■□□□□ 0.95
VPS45Q9NRW7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 AP003097.1-201ENST00000530657 1135 ntBASIC20.99■□□□□ 0.95
VPS45Q9NRW7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 AC011484.1-201ENST00000377652 1995 ntBASIC20.99■□□□□ 0.95
VPS45Q9NRW7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS45Q9NRW7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS45Q9NRW7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS45Q9NRW7 RBM17P2-201ENST00000616397 1405 ntBASIC20.98■□□□□ 0.95
VPS45Q9NRW7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS45Q9NRW7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS45Q9NRW7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS45Q9NRW7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms