Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 KRT87P-202ENST00000534226 1464 ntBASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 AC079140.4-201ENST00000507448 529 ntBASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDC42SE2Q9NRR3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 AC138907.5-202ENST00000569484 235 ntBASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 AL136967.2-201ENST00000623968 743 ntBASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 MIR2861-201ENST00000636310 90 ntBASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 AC116050.2-201ENST00000612102 1779 ntBASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDC42SE2Q9NRR3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDC42SE2Q9NRR3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 AL358852.1-201ENST00000623174 1268 ntBASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDC42SE2Q9NRR3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms