Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 AC010141.2-201ENST00000452426 721 ntBASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 AC087289.5-201ENST00000586076 3175 ntBASIC19.36■□□□□ 0.69
SLC52A3Q9NQ40 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 AL691432.2-201ENST00000607222 2038 ntBASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC52A3Q9NQ40 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 SLC7A5P2-201ENST00000553010 536 ntBASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 MIR6084-201ENST00000622012 110 ntBASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 AL358852.1-201ENST00000623174 1268 ntBASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 KRT8P36-201ENST00000489121 1440 ntBASIC19.34■□□□□ 0.69
SLC52A3Q9NQ40 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC52A3Q9NQ40 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC52A3Q9NQ40 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC52A3Q9NQ40 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
SLC52A3Q9NQ40 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC52A3Q9NQ40 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC52A3Q9NQ40 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SLC52A3Q9NQ40 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC52A3Q9NQ40 IRS3P-201ENST00000223076 1006 ntBASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 BX323043.1-201ENST00000641006 1765 ntBASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
SLC52A3Q9NQ40 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 AC018445.3-201ENST00000624177 1945 ntBASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 PKD1P6-201ENST00000343738 4769 ntBASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC52A3Q9NQ40 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms