Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TM9SF3Q9HD45 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.43■□□□□ 0.86
TM9SF3Q9HD45 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 C1QBPP2-201ENST00000528754 825 ntBASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 FAM197Y4-202ENST00000622692 608 ntBASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM9SF3Q9HD45 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 AC105020.6-201ENST00000621523 1217 ntBASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM9SF3Q9HD45 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 AC233263.1-201ENST00000578059 224 ntBASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 RN7SL471P-201ENST00000580476 299 ntBASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.4■□□□□ 0.86
TM9SF3Q9HD45 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
TM9SF3Q9HD45 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TM9SF3Q9HD45 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.39■□□□□ 0.86
TM9SF3Q9HD45 AC116050.2-201ENST00000612102 1779 ntBASIC20.39■□□□□ 0.86
TM9SF3Q9HD45 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM9SF3Q9HD45 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.38■□□□□ 0.85
TM9SF3Q9HD45 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms