Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 AC112907.3-201ENST00000577781 2400 ntBASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 AC243732.1-201ENST00000612648 864 ntBASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.6■□□□□ 0.73
LRTM1Q9HBL6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 RBM17P2-201ENST00000616397 1405 ntBASIC19.59■□□□□ 0.73
LRTM1Q9HBL6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LRTM1Q9HBL6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRTM1Q9HBL6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LRTM1Q9HBL6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.58■□□□□ 0.73
LRTM1Q9HBL6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRTM1Q9HBL6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.58■□□□□ 0.73
LRTM1Q9HBL6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 AC091799.1-201ENST00000422823 811 ntBASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 SLC7A5P1-201ENST00000568957 537 ntBASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM1Q9HBL6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 ZNRF2P3-201ENST00000424200 374 ntBASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.57■□□□□ 0.72
LRTM1Q9HBL6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 AFG3L1P-217ENST00000557444 2447 ntBASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM1Q9HBL6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms