Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 AC137761.2-201ENST00000561729 223 ntBASIC19.54■□□□□ 0.72
BRF2Q9HAW0 RARRES2P6-201ENST00000567333 442 ntBASIC19.54■□□□□ 0.72
BRF2Q9HAW0 AC145350.3-201ENST00000569033 163 ntBASIC19.54■□□□□ 0.72
BRF2Q9HAW0 AC013268.1-206ENST00000638368 961 ntBASIC19.54■□□□□ 0.72
BRF2Q9HAW0 AC112229.1-201ENST00000639295 961 ntBASIC19.54■□□□□ 0.72
BRF2Q9HAW0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
BRF2Q9HAW0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRF2Q9HAW0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 PGM5P4-201ENST00000421970 445 ntBASIC19.52■□□□□ 0.72
BRF2Q9HAW0 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.52■□□□□ 0.72
BRF2Q9HAW0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.52■□□□□ 0.72
BRF2Q9HAW0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRF2Q9HAW0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BRF2Q9HAW0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
BRF2Q9HAW0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 AC016769.1-201ENST00000409132 1010 ntBASIC19.5■□□□□ 0.71
BRF2Q9HAW0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 SLC25A24-204ENST00000569674 2357 ntBASIC19.5■□□□□ 0.71
BRF2Q9HAW0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRF2Q9HAW0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF2Q9HAW0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF2Q9HAW0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
BRF2Q9HAW0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF2Q9HAW0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRF2Q9HAW0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms