Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.71■■□□□ 1.07
NSUN3Q9H649 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 MMP23A-201ENST00000234610 1017 ntBASIC21.71■■□□□ 1.07
NSUN3Q9H649 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.71■■□□□ 1.07
NSUN3Q9H649 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.71■■□□□ 1.07
NSUN3Q9H649 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 AP003071.4-201ENST00000562276 1284 ntBASIC21.71■■□□□ 1.07
NSUN3Q9H649 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NSUN3Q9H649 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NSUN3Q9H649 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NSUN3Q9H649 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NSUN3Q9H649 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.7■■□□□ 1.06
NSUN3Q9H649 AL590326.2-201ENST00000625139 305 ntBASIC21.7■■□□□ 1.06
NSUN3Q9H649 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.7■■□□□ 1.06
NSUN3Q9H649 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.7■■□□□ 1.06
NSUN3Q9H649 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NSUN3Q9H649 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NSUN3Q9H649 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NSUN3Q9H649 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.69■■□□□ 1.06
NSUN3Q9H649 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NSUN3Q9H649 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NSUN3Q9H649 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.69■■□□□ 1.06
NSUN3Q9H649 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NSUN3Q9H649 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.69■■□□□ 1.06
NSUN3Q9H649 AL049597.2-201ENST00000565575 961 ntBASIC21.69■■□□□ 1.06
NSUN3Q9H649 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.69■■□□□ 1.06
NSUN3Q9H649 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.69■■□□□ 1.06
NSUN3Q9H649 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NSUN3Q9H649 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.69■■□□□ 1.06
NSUN3Q9H649 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NSUN3Q9H649 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NSUN3Q9H649 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.68■■□□□ 1.06
NSUN3Q9H649 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSUN3Q9H649 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NSUN3Q9H649 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.68■■□□□ 1.06
NSUN3Q9H649 PGM5P4-201ENST00000421970 445 ntBASIC21.68■■□□□ 1.06
NSUN3Q9H649 AL355355.2-201ENST00000442321 338 ntBASIC21.68■■□□□ 1.06
NSUN3Q9H649 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.68■■□□□ 1.06
NSUN3Q9H649 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.68■■□□□ 1.06
NSUN3Q9H649 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.68■■□□□ 1.06
NSUN3Q9H649 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSUN3Q9H649 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.68■■□□□ 1.06
NSUN3Q9H649 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSUN3Q9H649 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NSUN3Q9H649 AC026471.6-201ENST00000622954 1905 ntBASIC21.68■■□□□ 1.06
NSUN3Q9H649 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NSUN3Q9H649 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NSUN3Q9H649 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NSUN3Q9H649 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NSUN3Q9H649 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NSUN3Q9H649 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.67■■□□□ 1.06
NSUN3Q9H649 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 AC092865.7-201ENST00000641832 219 ntBASIC21.67■■□□□ 1.06
NSUN3Q9H649 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NSUN3Q9H649 AC010542.4-201ENST00000563151 1910 ntBASIC21.67■■□□□ 1.06
NSUN3Q9H649 AL117328.2-201ENST00000624617 1940 ntBASIC21.67■■□□□ 1.06
NSUN3Q9H649 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NSUN3Q9H649 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NSUN3Q9H649 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NSUN3Q9H649 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NSUN3Q9H649 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.66■■□□□ 1.06
NSUN3Q9H649 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NSUN3Q9H649 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms