Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 MIR663A-201ENST00000385250 93 ntBASIC18.16■□□□□ 0.5
NELFAQ9H3P2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 AL121603.2-201ENST00000557373 2117 ntBASIC18.16■□□□□ 0.5
NELFAQ9H3P2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 CYP2T1P-201ENST00000432607 1285 ntBASIC18.15■□□□□ 0.5
NELFAQ9H3P2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 AC005181.1-201ENST00000604782 1256 ntBASIC18.15■□□□□ 0.5
NELFAQ9H3P2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NELFAQ9H3P2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
NELFAQ9H3P2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.14■□□□□ 0.5
NELFAQ9H3P2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.14■□□□□ 0.5
NELFAQ9H3P2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.14■□□□□ 0.5
NELFAQ9H3P2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NELFAQ9H3P2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NELFAQ9H3P2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 AC016405.3-201ENST00000607710 860 ntBASIC18.14■□□□□ 0.49
NELFAQ9H3P2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NELFAQ9H3P2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 AL162412.1-201ENST00000567129 965 ntBASIC18.13■□□□□ 0.49
NELFAQ9H3P2 AL591742.1-201ENST00000604433 565 ntBASIC18.13■□□□□ 0.49
NELFAQ9H3P2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 AC007225.1-201ENST00000566331 1836 ntBASIC18.13■□□□□ 0.49
NELFAQ9H3P2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NELFAQ9H3P2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NELFAQ9H3P2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms