Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
LSG1Q9H089 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.44■■□□□ 1.5
LSG1Q9H089 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.44■■□□□ 1.5
LSG1Q9H089 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.44■■□□□ 1.5
LSG1Q9H089 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
LSG1Q9H089 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.44■■□□□ 1.5
LSG1Q9H089 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
LSG1Q9H089 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LSG1Q9H089 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
LSG1Q9H089 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
LSG1Q9H089 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSG1Q9H089 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.43■■□□□ 1.5
LSG1Q9H089 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSG1Q9H089 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSG1Q9H089 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSG1Q9H089 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.43■■□□□ 1.5
LSG1Q9H089 AL391422.3-201ENST00000603791 2761 ntBASIC24.43■■□□□ 1.5
LSG1Q9H089 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSG1Q9H089 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSG1Q9H089 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.43■■□□□ 1.5
LSG1Q9H089 CYP21A1P-202ENST00000354927 1481 ntBASIC24.43■■□□□ 1.5
LSG1Q9H089 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSG1Q9H089 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.43■■□□□ 1.5
LSG1Q9H089 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.42■■□□□ 1.5
LSG1Q9H089 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.42■■□□□ 1.5
LSG1Q9H089 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.42■■□□□ 1.5
LSG1Q9H089 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
LSG1Q9H089 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.42■■□□□ 1.5
LSG1Q9H089 AC099778.1-201ENST00000568593 1911 ntBASIC24.42■■□□□ 1.5
LSG1Q9H089 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 MIR935-201ENST00000401179 91 ntBASIC24.42■■□□□ 1.5
LSG1Q9H089 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.42■■□□□ 1.5
LSG1Q9H089 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.42■■□□□ 1.5
LSG1Q9H089 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.42■■□□□ 1.5
LSG1Q9H089 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 BID-214ENST00000617586 542 ntTSL 5 BASIC24.42■■□□□ 1.5
LSG1Q9H089 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
LSG1Q9H089 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.42■■□□□ 1.5
LSG1Q9H089 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LSG1Q9H089 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LSG1Q9H089 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSG1Q9H089 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.41■■□□□ 1.5
LSG1Q9H089 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSG1Q9H089 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.41■■□□□ 1.5
LSG1Q9H089 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSG1Q9H089 IKBKGP1-201ENST00000612193 1073 ntBASIC24.41■■□□□ 1.5
LSG1Q9H089 AC087633.2-202ENST00000565166 1439 ntBASIC24.41■■□□□ 1.5
LSG1Q9H089 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
LSG1Q9H089 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.4■■□□□ 1.5
LSG1Q9H089 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 RARRES2P4-201ENST00000514074 484 ntBASIC24.4■■□□□ 1.5
LSG1Q9H089 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
LSG1Q9H089 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.4■■□□□ 1.5
LSG1Q9H089 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
LSG1Q9H089 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.4■■□□□ 1.5
LSG1Q9H089 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LSG1Q9H089 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.39■■□□□ 1.5
LSG1Q9H089 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.39■■□□□ 1.5
LSG1Q9H089 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.39■■□□□ 1.5
LSG1Q9H089 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LSG1Q9H089 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LSG1Q9H089 SMG8-203ENST00000578922 2178 ntBASIC24.39■■□□□ 1.5
LSG1Q9H089 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.39■■□□□ 1.5
LSG1Q9H089 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.39■■□□□ 1.5
LSG1Q9H089 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.39■■□□□ 1.5
LSG1Q9H089 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.39■■□□□ 1.49
LSG1Q9H089 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.39■■□□□ 1.49
LSG1Q9H089 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms