Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 PCDHAC2-203ENST00000615316 3011 ntBASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 SMG8-203ENST00000578922 2178 ntBASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PHACTR1Q9C0D0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 IRS3P-201ENST00000223076 1006 ntBASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 AC243732.1-201ENST00000612648 864 ntBASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHACTR1Q9C0D0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 SUDS3P1-201ENST00000505831 966 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DUX4L2-201ENST00000561772 1275 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DUX4L6-201ENST00000626483 1275 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DUX4L1-201ENST00000627662 1275 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DUX4L8-201ENST00000629013 1275 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DUX4L3-201ENST00000630187 1275 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DUX4L7-201ENST00000630678 1275 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DUX4L5-201ENST00000630834 1275 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 KRT8P36-201ENST00000489121 1440 ntBASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHACTR1Q9C0D0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHACTR1Q9C0D0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
PHACTR1Q9C0D0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHACTR1Q9C0D0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHACTR1Q9C0D0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.64■□□□□ 0.9
PHACTR1Q9C0D0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHACTR1Q9C0D0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
PHACTR1Q9C0D0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.64■□□□□ 0.9
PHACTR1Q9C0D0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHACTR1Q9C0D0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHACTR1Q9C0D0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms