Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS4Q9BT78 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPS4Q9BT78 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 PBX2P1-201ENST00000493219 1291 ntBASIC18.67■□□□□ 0.58
COPS4Q9BT78 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPS4Q9BT78 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.67■□□□□ 0.58
COPS4Q9BT78 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 IGHV3-19-201ENST00000521488 291 ntBASIC18.66■□□□□ 0.58
COPS4Q9BT78 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
COPS4Q9BT78 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPS4Q9BT78 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS4Q9BT78 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS4Q9BT78 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS4Q9BT78 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.65■□□□□ 0.58
COPS4Q9BT78 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPS4Q9BT78 AC027682.1-201ENST00000562846 899 ntBASIC18.65■□□□□ 0.58
COPS4Q9BT78 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS4Q9BT78 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPS4Q9BT78 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPS4Q9BT78 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.65■□□□□ 0.58
COPS4Q9BT78 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COPS4Q9BT78 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COPS4Q9BT78 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.64■□□□□ 0.57
COPS4Q9BT78 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 AC099791.1-201ENST00000416440 715 ntBASIC18.64■□□□□ 0.57
COPS4Q9BT78 AC133561.4-201ENST00000566112 224 ntBASIC18.64■□□□□ 0.57
COPS4Q9BT78 SMUG1P1-201ENST00000590640 811 ntBASIC18.64■□□□□ 0.57
COPS4Q9BT78 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.64■□□□□ 0.57
COPS4Q9BT78 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
COPS4Q9BT78 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
COPS4Q9BT78 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COPS4Q9BT78 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COPS4Q9BT78 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPS4Q9BT78 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPS4Q9BT78 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPS4Q9BT78 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPS4Q9BT78 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.63■□□□□ 0.57
COPS4Q9BT78 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.63■□□□□ 0.57
COPS4Q9BT78 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPS4Q9BT78 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms