Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.42■■□□□ 1.02
CDCA3Q99618 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA3Q99618 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA3Q99618 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA3Q99618 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.42■■□□□ 1.02
CDCA3Q99618 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.42■■□□□ 1.02
CDCA3Q99618 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA3Q99618 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA3Q99618 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA3Q99618 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA3Q99618 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.41■■□□□ 1.02
CDCA3Q99618 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA3Q99618 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA3Q99618 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDCA3Q99618 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.41■■□□□ 1.02
CDCA3Q99618 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.41■■□□□ 1.02
CDCA3Q99618 AL590326.2-201ENST00000625139 305 ntBASIC21.41■■□□□ 1.02
CDCA3Q99618 AC092865.7-201ENST00000641832 219 ntBASIC21.41■■□□□ 1.02
CDCA3Q99618 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.4■■□□□ 1.02
CDCA3Q99618 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CDCA3Q99618 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.4■■□□□ 1.02
CDCA3Q99618 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCA3Q99618 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.4■■□□□ 1.02
CDCA3Q99618 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CDCA3Q99618 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.4■■□□□ 1.02
CDCA3Q99618 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.4■■□□□ 1.02
CDCA3Q99618 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.4■■□□□ 1.02
CDCA3Q99618 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCA3Q99618 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.4■■□□□ 1.02
CDCA3Q99618 KRT18P35-201ENST00000510488 1269 ntBASIC21.4■■□□□ 1.02
CDCA3Q99618 AC023632.3-201ENST00000521633 145 ntBASIC21.4■■□□□ 1.02
CDCA3Q99618 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCA3Q99618 AC145285.6-201ENST00000604632 637 ntBASIC21.4■■□□□ 1.02
CDCA3Q99618 AC073195.1-201ENST00000607241 877 ntBASIC21.4■■□□□ 1.02
CDCA3Q99618 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.4■■□□□ 1.02
CDCA3Q99618 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCA3Q99618 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCA3Q99618 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.4■■□□□ 1.02
CDCA3Q99618 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDCA3Q99618 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDCA3Q99618 NBPF21P-201ENST00000425093 1451 ntBASIC21.39■■□□□ 1.02
CDCA3Q99618 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.39■■□□□ 1.02
CDCA3Q99618 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDCA3Q99618 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDCA3Q99618 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDCA3Q99618 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDCA3Q99618 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA3Q99618 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA3Q99618 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA3Q99618 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CDCA3Q99618 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.39■■□□□ 1.01
CDCA3Q99618 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.39■■□□□ 1.01
CDCA3Q99618 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.39■■□□□ 1.01
CDCA3Q99618 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CDCA3Q99618 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA3Q99618 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA3Q99618 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDCA3Q99618 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CDCA3Q99618 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.38■■□□□ 1.01
CDCA3Q99618 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA3Q99618 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDCA3Q99618 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.38■■□□□ 1.01
CDCA3Q99618 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.38■■□□□ 1.01
CDCA3Q99618 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.38■■□□□ 1.01
CDCA3Q99618 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA3Q99618 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA3Q99618 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDCA3Q99618 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCA3Q99618 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 ARMC10P1-201ENST00000313754 855 ntBASIC21.37■■□□□ 1.01
CDCA3Q99618 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.37■■□□□ 1.01
CDCA3Q99618 FAM197Y1-201ENST00000421178 764 ntBASIC21.37■■□□□ 1.01
CDCA3Q99618 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCA3Q99618 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
CDCA3Q99618 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.37■■□□□ 1.01
CDCA3Q99618 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 AL049597.2-201ENST00000565575 961 ntBASIC21.37■■□□□ 1.01
CDCA3Q99618 AC005363.2-201ENST00000618631 242 ntBASIC21.37■■□□□ 1.01
CDCA3Q99618 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CDCA3Q99618 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CDCA3Q99618 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDCA3Q99618 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.37■■□□□ 1.01
CDCA3Q99618 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA3Q99618 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA3Q99618 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDCA3Q99618 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms