Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 VPS74YDR372C 1038 nt1.3□□□□□ -2.2
ATG40Q99325 YIL102CYIL102C 306 nt1.3□□□□□ -2.2
ATG40Q99325 YLR217WYLR217W 324 nt1.3□□□□□ -2.2
ATG40Q99325 HRI1YLR301W 735 nt1.3□□□□□ -2.2
ATG40Q99325 VPS35YJL154C 2835 nt1.29□□□□□ -2.2
ATG40Q99325 NAM7YMR080C 2916 nt1.29□□□□□ -2.2
ATG40Q99325 RBK1YCR036W 1002 nt1.29□□□□□ -2.2
ATG40Q99325 YCR087C-AYCR087C-A 462 nt1.29□□□□□ -2.2
ATG40Q99325 YDL062WYDL062W 426 nt1.29□□□□□ -2.2
ATG40Q99325 YDR115WYDR115W 318 nt1.29□□□□□ -2.2
ATG40Q99325 YGL024WYGL024W 336 nt1.29□□□□□ -2.2
ATG40Q99325 YGL042CYGL042C 306 nt1.29□□□□□ -2.2
ATG40Q99325 AIM18YHR198C 966 nt1.29□□□□□ -2.2
ATG40Q99325 MSL1YIR009W 336 nt1.29□□□□□ -2.2
ATG40Q99325 TEN1YLR010C 483 nt1.29□□□□□ -2.2
ATG40Q99325 YLR302CYLR302C 363 nt1.29□□□□□ -2.2
ATG40Q99325 ATP18YML081C-A 180 nt1.29□□□□□ -2.2
ATG40Q99325 TAP42YMR028W 1101 nt1.29□□□□□ -2.2
ATG40Q99325 YMR052C-AYMR052C-A 366 nt1.29□□□□□ -2.2
ATG40Q99325 YOR394C-AYOR394C-A 168 nt1.29□□□□□ -2.2
ATG40Q99325 YLR422WYLR422W 5799 nt1.28□□□□□ -2.2
ATG40Q99325 BTT1YDR252W 450 nt1.28□□□□□ -2.2
ATG40Q99325 RAD6YGL058W 519 nt1.28□□□□□ -2.2
ATG40Q99325 SMD1YGR074W 441 nt1.28□□□□□ -2.2
ATG40Q99325 COX3Q0275 810 nt1.28□□□□□ -2.2
ATG40Q99325 RPL40AYIL148W 387 nt1.28□□□□□ -2.2
ATG40Q99325 YLR255CYLR255C 354 nt1.28□□□□□ -2.2
ATG40Q99325 YLR458WYLR458W 381 nt1.28□□□□□ -2.2
ATG40Q99325 CSI1YMR025W 888 nt1.28□□□□□ -2.2
ATG40Q99325 ERG29YMR134W 714 nt1.28□□□□□ -2.2
ATG40Q99325 SFG1YOR315W 1041 nt1.28□□□□□ -2.2
ATG40Q99325 YPL238CYPL238C 390 nt1.28□□□□□ -2.2
ATG40Q99325 ARP7YPR034W 1434 nt1.28□□□□□ -2.2
ATG40Q99325 MAD1YGL086W 2250 nt1.28□□□□□ -2.2
ATG40Q99325 YJR039WYJR039W 3366 nt1.27□□□□□ -2.21
ATG40Q99325 SPC72YAL047C 1869 nt1.27□□□□□ -2.21
ATG40Q99325 YCR100CYCR100C 951 nt1.27□□□□□ -2.21
ATG40Q99325 YGL230CYGL230C 444 nt1.27□□□□□ -2.21
ATG40Q99325 RSM27YGR215W 333 nt1.27□□□□□ -2.21
ATG40Q99325 YLR031WYLR031W 561 nt1.27□□□□□ -2.21
ATG40Q99325 SEN15YMR059W 387 nt1.27□□□□□ -2.21
ATG40Q99325 OST2YOR103C 393 nt1.27□□□□□ -2.21
ATG40Q99325 MGR1YCL044C 1254 nt1.27□□□□□ -2.21
ATG40Q99325 snR59snR59 78 nt1.26□□□□□ -2.21
ATG40Q99325 YDR286CYDR286C 345 nt1.26□□□□□ -2.21
ATG40Q99325 RSM18YER050C 417 nt1.26□□□□□ -2.21
ATG40Q99325 LIN1YHR156C 1023 nt1.26□□□□□ -2.21
ATG40Q99325 IST3YIR005W 447 nt1.26□□□□□ -2.21
ATG40Q99325 YIR018C-AYIR018C-A 138 nt1.26□□□□□ -2.21
ATG40Q99325 YJL133C-AYJL133C-A 225 nt1.26□□□□□ -2.21
ATG40Q99325 BRX1YOL077C 876 nt1.26□□□□□ -2.21
ATG40Q99325 ATP15YPL271W 189 nt1.26□□□□□ -2.21
ATG40Q99325 YPR177CYPR177C 372 nt1.26□□□□□ -2.21
ATG40Q99325 PET309YLR067C 2898 nt1.26□□□□□ -2.21
ATG40Q99325 YLR419WYLR419W 4308 nt1.26□□□□□ -2.21
ATG40Q99325 PET127YOR017W 2403 nt1.25□□□□□ -2.21
ATG40Q99325 PBP4YDL053C 558 nt1.25□□□□□ -2.21
ATG40Q99325 CRD1YDL142C 852 nt1.25□□□□□ -2.21
ATG40Q99325 DAD1YDR016C 285 nt1.25□□□□□ -2.21
ATG40Q99325 YDR537CYDR537C 606 nt1.25□□□□□ -2.21
ATG40Q99325 YGR109W-AYGR109W-A 873 nt1.25□□□□□ -2.21
ATG40Q99325 YHR073W-AYHR073W-A 177 nt1.25□□□□□ -2.21
ATG40Q99325 RPI1YIL119C 1224 nt1.25□□□□□ -2.21
ATG40Q99325 PEP8YJL053W 1140 nt1.25□□□□□ -2.21
ATG40Q99325 CAT8YMR280C 4302 nt1.25□□□□□ -2.21
ATG40Q99325 NUP192YJL039C 5052 nt1.25□□□□□ -2.21
ATG40Q99325 HIR3YJR140C 4947 nt1.25□□□□□ -2.21
ATG40Q99325 TDA9YML081W 3756 nt1.24□□□□□ -2.21
ATG40Q99325 SOK2YMR016C 2358 nt1.24□□□□□ -2.21
ATG40Q99325 RPL31AYDL075W 342 nt1.24□□□□□ -2.21
ATG40Q99325 TDA2YER071C 381 nt1.24□□□□□ -2.21
ATG40Q99325 PGD1YGL025C 1194 nt1.24□□□□□ -2.21
ATG40Q99325 YIP1YGR172C 747 nt1.24□□□□□ -2.21
ATG40Q99325 YHC1YLR298C 696 nt1.24□□□□□ -2.21
ATG40Q99325 TAZ1YPR140W 1146 nt1.24□□□□□ -2.21
ATG40Q99325 PLC1YPL268W 2610 nt1.24□□□□□ -2.21
ATG40Q99325 FYV8YGR196C 2454 nt1.24□□□□□ -2.21
ATG40Q99325 SPC98YNL126W 2541 nt1.23□□□□□ -2.21
ATG40Q99325 YDR210W-AYDR210W-A 1317 nt1.23□□□□□ -2.21
ATG40Q99325 YOR343W-AYOR343W-A 1317 nt1.23□□□□□ -2.21
ATG40Q99325 PFD1YJL179W 330 nt1.23□□□□□ -2.21
ATG40Q99325 NCE101YJL205C 162 nt1.23□□□□□ -2.21
ATG40Q99325 HSK3YKL138C-A 210 nt1.23□□□□□ -2.21
ATG40Q99325 GRX8YLR364W 330 nt1.23□□□□□ -2.21
ATG40Q99325 SHE4YOR035C 2370 nt1.23□□□□□ -2.21
ATG40Q99325 MSH6YDR097C 3729 nt1.23□□□□□ -2.21
ATG40Q99325 GNT1YOR320C 1476 nt1.23□□□□□ -2.21
ATG40Q99325 STB4YMR019W 2850 nt1.22□□□□□ -2.21
ATG40Q99325 BRO1YPL084W 2535 nt1.22□□□□□ -2.21
ATG40Q99325 PAU3YCR104W 375 nt1.22□□□□□ -2.21
ATG40Q99325 YDR042CYDR042C 603 nt1.22□□□□□ -2.21
ATG40Q99325 YDR194W-AYDR194W-A 153 nt1.22□□□□□ -2.21
ATG40Q99325 TPM2YIL138C 486 nt1.22□□□□□ -2.21
ATG40Q99325 CMC2YBL059C-A 330 nt1.22□□□□□ -2.21
ATG40Q99325 YNL235CYNL235C 432 nt1.22□□□□□ -2.21
ATG40Q99325 MEI5YPL121C 669 nt1.22□□□□□ -2.21
ATG40Q99325 TFC8YPL007C 1767 nt1.21□□□□□ -2.22
ATG40Q99325 CHS1YNL192W 3396 nt1.21□□□□□ -2.22
ATG40Q99325 RPL29YFR032C-A 180 nt1.21□□□□□ -2.22
ATG40Q99325 DFG10YIL049W 762 nt1.21□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 20.4 ms