Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 AL160237.2-201ENST00000556165 472 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 PRELID1P1-202ENST00000567272 903 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 TERC-201ENST00000602385 541 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 NBPF21P-201ENST00000425093 1451 ntBASIC6.32□□□□□ -1.4
HMCN1Q96RW7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMCN1Q96RW7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC120114.3-201ENST00000611923 658 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 HYMAI.1-201ENST00000620949 238 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 HOMER2P1-201ENST00000455653 964 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC106795.1-205ENST00000512851 1056 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 CD70-202ENST00000423145 881 ntTSL 2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 HLA-V-201ENST00000429037 534 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 MIR3180-1-201ENST00000580374 94 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 MIR3180-3-201ENST00000584616 94 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 HTR5BP-201ENST00000430851 1154 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 ATP5G2P1-201ENST00000433580 426 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC079776.4-201ENST00000511039 504 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 SLC25A6P4-201ENST00000586535 553 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC6.31□□□□□ -1.4
HMCN1Q96RW7 AC243732.1-201ENST00000612648 864 ntBASIC6.31□□□□□ -1.4
HMCN1Q96RW7 LINC00543-201ENST00000567234 1845 ntBASIC6.3□□□□□ -1.4
HMCN1Q96RW7 AC079630.1-202ENST00000618127 1840 ntBASIC6.3□□□□□ -1.4
HMCN1Q96RW7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 MIR1233-2-201ENST00000408138 82 ntBASIC6.3□□□□□ -1.4
HMCN1Q96RW7 MIR1233-1-201ENST00000408722 82 ntBASIC6.3□□□□□ -1.4
HMCN1Q96RW7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 SLC25A1P1-201ENST00000528351 927 ntBASIC6.3□□□□□ -1.4
HMCN1Q96RW7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC6.3□□□□□ -1.4
HMCN1Q96RW7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms