Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 AC124283.5-201ENST00000624661 1809 ntBASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 AL390955.1-201ENST00000428694 934 ntBASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 AC005829.2-201ENST00000571422 1056 ntBASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSMD1Q96PZ7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.48■□□□□ 0.39
CSMD1Q96PZ7 AC027702.1-201ENST00000563810 1770 ntBASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 NUDT16P1-203ENST00000513809 620 ntBASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 GPALPP1-207ENST00000611650 899 ntBASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 AC110285.5-201ENST00000611501 352 ntBASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.47■□□□□ 0.39
CSMD1Q96PZ7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 AC092053.2-201ENST00000640557 1818 ntBASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 UNC93B2-201ENST00000285383 730 ntBASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 AC091076.1-201ENST00000610741 619 ntBASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 AC004263.2-201ENST00000617183 678 ntBASIC17.46■□□□□ 0.39
CSMD1Q96PZ7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms