Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.76■□□□□ 0.91
SHDQ96IW2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.75■□□□□ 0.91
SHDQ96IW2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.75■□□□□ 0.91
SHDQ96IW2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHDQ96IW2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.75■□□□□ 0.91
SHDQ96IW2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.75■□□□□ 0.91
SHDQ96IW2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHDQ96IW2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
SHDQ96IW2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.74■□□□□ 0.91
SHDQ96IW2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SHDQ96IW2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.74■□□□□ 0.91
SHDQ96IW2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHDQ96IW2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SHDQ96IW2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.74■□□□□ 0.91
SHDQ96IW2 AC073195.1-201ENST00000607241 877 ntBASIC20.74■□□□□ 0.91
SHDQ96IW2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.74■□□□□ 0.91
SHDQ96IW2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHDQ96IW2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.74■□□□□ 0.91
SHDQ96IW2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SHDQ96IW2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHDQ96IW2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHDQ96IW2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHDQ96IW2 FAM99A-202ENST00000538190 1989 ntBASIC20.74■□□□□ 0.91
SHDQ96IW2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.73■□□□□ 0.91
SHDQ96IW2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.73■□□□□ 0.91
SHDQ96IW2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SHDQ96IW2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SHDQ96IW2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.73■□□□□ 0.91
SHDQ96IW2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
SHDQ96IW2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
SHDQ96IW2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.73■□□□□ 0.91
SHDQ96IW2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SHDQ96IW2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.73■□□□□ 0.91
SHDQ96IW2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.73■□□□□ 0.91
SHDQ96IW2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHDQ96IW2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.72■□□□□ 0.91
SHDQ96IW2 FAM197Y1-201ENST00000421178 764 ntBASIC20.72■□□□□ 0.91
SHDQ96IW2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.72■□□□□ 0.91
SHDQ96IW2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.72■□□□□ 0.91
SHDQ96IW2 MIR6786-201ENST00000616843 113 ntBASIC20.72■□□□□ 0.91
SHDQ96IW2 NBPF21P-201ENST00000425093 1451 ntBASIC20.72■□□□□ 0.91
SHDQ96IW2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SHDQ96IW2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHDQ96IW2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHDQ96IW2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHDQ96IW2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.71■□□□□ 0.91
SHDQ96IW2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHDQ96IW2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHDQ96IW2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHDQ96IW2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.71■□□□□ 0.91
SHDQ96IW2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SHDQ96IW2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.71■□□□□ 0.91
SHDQ96IW2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.71■□□□□ 0.91
SHDQ96IW2 AC127496.7-201ENST00000625110 1798 ntBASIC20.71■□□□□ 0.91
SHDQ96IW2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHDQ96IW2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHDQ96IW2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHDQ96IW2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHDQ96IW2 UNC93B2-201ENST00000285383 730 ntBASIC20.7■□□□□ 0.9
SHDQ96IW2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.7■□□□□ 0.9
SHDQ96IW2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SHDQ96IW2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.7■□□□□ 0.9
SHDQ96IW2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHDQ96IW2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.7■□□□□ 0.9
SHDQ96IW2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.7■□□□□ 0.9
SHDQ96IW2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
SHDQ96IW2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SHDQ96IW2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
SHDQ96IW2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SHDQ96IW2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHDQ96IW2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms