Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF31Q96EP0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RNF31Q96EP0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF31Q96EP0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF31Q96EP0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF31Q96EP0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
RNF31Q96EP0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 AC128676.1-201ENST00000454392 318 ntBASIC19.64■□□□□ 0.73
RNF31Q96EP0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF31Q96EP0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RNF31Q96EP0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF31Q96EP0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF31Q96EP0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF31Q96EP0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RNF31Q96EP0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF31Q96EP0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF31Q96EP0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF31Q96EP0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 AL162412.1-201ENST00000567129 965 ntBASIC19.63■□□□□ 0.73
RNF31Q96EP0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF31Q96EP0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 AC007322.3-201ENST00000426526 701 ntBASIC19.62■□□□□ 0.73
RNF31Q96EP0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 FAM21FP-204ENST00000608637 956 ntBASIC19.62■□□□□ 0.73
RNF31Q96EP0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF31Q96EP0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF31Q96EP0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF31Q96EP0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF31Q96EP0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF31Q96EP0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF31Q96EP0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF31Q96EP0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF31Q96EP0 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF31Q96EP0 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF31Q96EP0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF31Q96EP0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF31Q96EP0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF31Q96EP0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF31Q96EP0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms