Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC073210.2-201ENST00000430369 194 ntBASIC26.28■■□□□ 1.8
ZNF428Q96B54 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF428Q96B54 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF428Q96B54 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF428Q96B54 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF428Q96B54 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF428Q96B54 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 AC008687.6-201ENST00000596318 630 ntBASIC26.27■■□□□ 1.8
ZNF428Q96B54 AC066615.1-201ENST00000640911 628 ntBASIC26.27■■□□□ 1.8
ZNF428Q96B54 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF428Q96B54 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC26.27■■□□□ 1.8
ZNF428Q96B54 FP700111.2-201ENST00000619190 1892 ntBASIC26.27■■□□□ 1.8
ZNF428Q96B54 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF428Q96B54 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF428Q96B54 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF428Q96B54 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.26■■□□□ 1.79
ZNF428Q96B54 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF428Q96B54 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF428Q96B54 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.26■■□□□ 1.79
ZNF428Q96B54 FAM201B-201ENST00000458407 597 ntBASIC26.26■■□□□ 1.79
ZNF428Q96B54 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF428Q96B54 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
ZNF428Q96B54 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.26■■□□□ 1.79
ZNF428Q96B54 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
ZNF428Q96B54 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF428Q96B54 AC092118.2-201ENST00000613495 667 ntBASIC26.26■■□□□ 1.79
ZNF428Q96B54 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
ZNF428Q96B54 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF428Q96B54 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF428Q96B54 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF428Q96B54 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF428Q96B54 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF428Q96B54 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF428Q96B54 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.25■■□□□ 1.79
ZNF428Q96B54 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF428Q96B54 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.25■■□□□ 1.79
ZNF428Q96B54 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.25■■□□□ 1.79
ZNF428Q96B54 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF428Q96B54 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
ZNF428Q96B54 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC26.25■■□□□ 1.79
ZNF428Q96B54 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF428Q96B54 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
ZNF428Q96B54 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZNF428Q96B54 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZNF428Q96B54 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZNF428Q96B54 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.24■■□□□ 1.79
ZNF428Q96B54 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.24■■□□□ 1.79
ZNF428Q96B54 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZNF428Q96B54 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.24■■□□□ 1.79
ZNF428Q96B54 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
ZNF428Q96B54 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
ZNF428Q96B54 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC26.24■■□□□ 1.79
ZNF428Q96B54 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.24■■□□□ 1.79
ZNF428Q96B54 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ZNF428Q96B54 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.23■■□□□ 1.79
ZNF428Q96B54 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC26.23■■□□□ 1.79
ZNF428Q96B54 AL121603.2-201ENST00000557373 2117 ntBASIC26.23■■□□□ 1.79
ZNF428Q96B54 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC26.23■■□□□ 1.79
ZNF428Q96B54 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC26.23■■□□□ 1.79
ZNF428Q96B54 AC091874.3-201ENST00000512672 1195 ntBASIC26.23■■□□□ 1.79
ZNF428Q96B54 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.23■■□□□ 1.79
ZNF428Q96B54 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
ZNF428Q96B54 MYC-209ENST00000641252 345 ntBASIC26.23■■□□□ 1.79
ZNF428Q96B54 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ZNF428Q96B54 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC26.23■■□□□ 1.79
ZNF428Q96B54 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ZNF428Q96B54 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.23■■□□□ 1.79
ZNF428Q96B54 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC26.22■■□□□ 1.79
ZNF428Q96B54 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
ZNF428Q96B54 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.22■■□□□ 1.79
ZNF428Q96B54 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
ZNF428Q96B54 CYP2T3P-201ENST00000601990 817 ntBASIC26.22■■□□□ 1.79
ZNF428Q96B54 AL356652.1-201ENST00000615962 565 ntBASIC26.22■■□□□ 1.79
ZNF428Q96B54 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.22■■□□□ 1.79
ZNF428Q96B54 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 FEM1AP1-201ENST00000431297 1995 ntBASIC26.22■■□□□ 1.79
ZNF428Q96B54 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ZNF428Q96B54 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZNF428Q96B54 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ZNF428Q96B54 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.21■■□□□ 1.79
ZNF428Q96B54 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms