Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN23Q96B33 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN23Q96B33 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN23Q96B33 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN23Q96B33 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 AC073195.1-201ENST00000607241 877 ntBASIC20.57■□□□□ 0.88
CLDN23Q96B33 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN23Q96B33 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN23Q96B33 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLDN23Q96B33 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN23Q96B33 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CLDN23Q96B33 RBM17P1-201ENST00000453646 1190 ntBASIC20.56■□□□□ 0.88
CLDN23Q96B33 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN23Q96B33 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN23Q96B33 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.56■□□□□ 0.88
CLDN23Q96B33 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN23Q96B33 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.56■□□□□ 0.88
CLDN23Q96B33 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CLDN23Q96B33 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLDN23Q96B33 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN23Q96B33 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLDN23Q96B33 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN23Q96B33 AC005521.1-201ENST00000393351 872 ntBASIC20.55■□□□□ 0.88
CLDN23Q96B33 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN23Q96B33 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN23Q96B33 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN23Q96B33 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN23Q96B33 NBPF21P-201ENST00000425093 1451 ntBASIC20.55■□□□□ 0.88
CLDN23Q96B33 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN23Q96B33 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN23Q96B33 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN23Q96B33 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 NUDT16P1-203ENST00000513809 620 ntBASIC20.54■□□□□ 0.88
CLDN23Q96B33 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 AC079598.2-202ENST00000546624 1451 ntBASIC20.54■□□□□ 0.88
CLDN23Q96B33 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN23Q96B33 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN23Q96B33 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN23Q96B33 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN23Q96B33 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN23Q96B33 KRT8P9-201ENST00000558927 1449 ntBASIC20.53■□□□□ 0.88
CLDN23Q96B33 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN23Q96B33 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN23Q96B33 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN23Q96B33 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN23Q96B33 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN23Q96B33 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN23Q96B33 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN23Q96B33 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN23Q96B33 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN23Q96B33 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN23Q96B33 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN23Q96B33 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CLDN23Q96B33 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN23Q96B33 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN23Q96B33 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN23Q96B33 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN23Q96B33 UNC93B2-201ENST00000285383 730 ntBASIC20.51■□□□□ 0.87
CLDN23Q96B33 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms