Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP9XQ93008 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP9XQ93008 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP9XQ93008 MIR1238-201ENST00000408483 83 ntBASIC17.96■□□□□ 0.47
USP9XQ93008 AK4P3-201ENST00000418260 669 ntBASIC17.96■□□□□ 0.47
USP9XQ93008 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.96■□□□□ 0.47
USP9XQ93008 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.96■□□□□ 0.47
USP9XQ93008 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.96■□□□□ 0.47
USP9XQ93008 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.96■□□□□ 0.47
USP9XQ93008 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP9XQ93008 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
USP9XQ93008 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
USP9XQ93008 AC026471.6-201ENST00000622954 1905 ntBASIC17.96■□□□□ 0.46
USP9XQ93008 AC139530.1-201ENST00000575312 1977 ntBASIC17.95■□□□□ 0.46
USP9XQ93008 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.95■□□□□ 0.46
USP9XQ93008 AC063952.2-201ENST00000498792 1227 ntBASIC17.95■□□□□ 0.46
USP9XQ93008 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.95■□□□□ 0.46
USP9XQ93008 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.95■□□□□ 0.46
USP9XQ93008 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.95■□□□□ 0.46
USP9XQ93008 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP9XQ93008 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.95■□□□□ 0.46
USP9XQ93008 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP9XQ93008 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP9XQ93008 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP9XQ93008 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP9XQ93008 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
USP9XQ93008 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP9XQ93008 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP9XQ93008 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.95■□□□□ 0.46
USP9XQ93008 AC022616.7-201ENST00000525383 220 ntBASIC17.95■□□□□ 0.46
USP9XQ93008 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.94■□□□□ 0.46
USP9XQ93008 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.94■□□□□ 0.46
USP9XQ93008 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.94■□□□□ 0.46
USP9XQ93008 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 AC027702.1-201ENST00000563810 1770 ntBASIC17.94■□□□□ 0.46
USP9XQ93008 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.94■□□□□ 0.46
USP9XQ93008 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
USP9XQ93008 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.94■□□□□ 0.46
USP9XQ93008 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.94■□□□□ 0.46
USP9XQ93008 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.94■□□□□ 0.46
USP9XQ93008 AL450487.1-201ENST00000426799 995 ntBASIC17.94■□□□□ 0.46
USP9XQ93008 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP9XQ93008 AC093323.1-202ENST00000635031 2045 ntBASIC17.94■□□□□ 0.46
USP9XQ93008 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
USP9XQ93008 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 AL031133.1-201ENST00000406807 723 ntBASIC17.93■□□□□ 0.46
USP9XQ93008 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.93■□□□□ 0.46
USP9XQ93008 AP000550.4-202ENST00000639755 178 ntBASIC17.93■□□□□ 0.46
USP9XQ93008 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.93■□□□□ 0.46
USP9XQ93008 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 AC010542.4-201ENST00000563151 1910 ntBASIC17.93■□□□□ 0.46
USP9XQ93008 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
USP9XQ93008 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
USP9XQ93008 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.93■□□□□ 0.46
USP9XQ93008 FAM8A6P-201ENST00000407496 1135 ntBASIC17.93■□□□□ 0.46
USP9XQ93008 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.93■□□□□ 0.46
USP9XQ93008 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
USP9XQ93008 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.93■□□□□ 0.46
USP9XQ93008 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.93■□□□□ 0.46
USP9XQ93008 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
USP9XQ93008 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.93■□□□□ 0.46
USP9XQ93008 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.93■□□□□ 0.46
USP9XQ93008 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP9XQ93008 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.92■□□□□ 0.46
USP9XQ93008 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.92■□□□□ 0.46
USP9XQ93008 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP9XQ93008 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
USP9XQ93008 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.92■□□□□ 0.46
USP9XQ93008 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
USP9XQ93008 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.92■□□□□ 0.46
USP9XQ93008 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.92■□□□□ 0.46
USP9XQ93008 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
USP9XQ93008 AL121829.2-201ENST00000620908 328 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms