Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCN1Q92616 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.11■□□□□ 0.49
GCN1Q92616 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GCN1Q92616 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCN1Q92616 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.11■□□□□ 0.49
GCN1Q92616 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.11■□□□□ 0.49
GCN1Q92616 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GCN1Q92616 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCN1Q92616 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.1■□□□□ 0.49
GCN1Q92616 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.1■□□□□ 0.49
GCN1Q92616 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 KSR1P1-201ENST00000446298 240 ntBASIC18.1■□□□□ 0.49
GCN1Q92616 UNC93B7-201ENST00000509439 705 ntBASIC18.1■□□□□ 0.49
GCN1Q92616 MIR3652-201ENST00000579335 131 ntBASIC18.1■□□□□ 0.49
GCN1Q92616 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.1■□□□□ 0.49
GCN1Q92616 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 LINC01960-201ENST00000563759 1884 ntBASIC18.1■□□□□ 0.49
GCN1Q92616 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.1■□□□□ 0.49
GCN1Q92616 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 AC091799.1-201ENST00000422823 811 ntBASIC18.1■□□□□ 0.49
GCN1Q92616 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.1■□□□□ 0.49
GCN1Q92616 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.1■□□□□ 0.49
GCN1Q92616 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.1■□□□□ 0.49
GCN1Q92616 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.1■□□□□ 0.49
GCN1Q92616 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.1■□□□□ 0.49
GCN1Q92616 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.1■□□□□ 0.49
GCN1Q92616 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCN1Q92616 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCN1Q92616 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.09■□□□□ 0.49
GCN1Q92616 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.09■□□□□ 0.49
GCN1Q92616 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GCN1Q92616 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.09■□□□□ 0.49
GCN1Q92616 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GCN1Q92616 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCN1Q92616 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCN1Q92616 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCN1Q92616 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.09■□□□□ 0.49
GCN1Q92616 AC004951.3-201ENST00000418645 1148 ntBASIC18.09■□□□□ 0.49
GCN1Q92616 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCN1Q92616 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.09■□□□□ 0.49
GCN1Q92616 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
GCN1Q92616 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCN1Q92616 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCN1Q92616 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.08■□□□□ 0.49
GCN1Q92616 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
GCN1Q92616 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GCN1Q92616 FAM220CP-201ENST00000395253 831 ntBASIC18.08■□□□□ 0.49
GCN1Q92616 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.08■□□□□ 0.49
GCN1Q92616 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
GCN1Q92616 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.08■□□□□ 0.48
GCN1Q92616 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GCN1Q92616 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.08■□□□□ 0.48
GCN1Q92616 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.08■□□□□ 0.48
GCN1Q92616 MESTP1-201ENST00000404287 994 ntBASIC18.08■□□□□ 0.48
GCN1Q92616 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
GCN1Q92616 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
GCN1Q92616 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.08■□□□□ 0.48
GCN1Q92616 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GCN1Q92616 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCN1Q92616 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCN1Q92616 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
GCN1Q92616 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCN1Q92616 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.07■□□□□ 0.48
GCN1Q92616 HMGA1P5-201ENST00000412453 271 ntBASIC18.07■□□□□ 0.48
GCN1Q92616 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GCN1Q92616 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.07■□□□□ 0.48
GCN1Q92616 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GCN1Q92616 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.07■□□□□ 0.48
GCN1Q92616 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.07■□□□□ 0.48
GCN1Q92616 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCN1Q92616 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GCN1Q92616 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.07■□□□□ 0.48
GCN1Q92616 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.07■□□□□ 0.48
GCN1Q92616 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.07■□□□□ 0.48
GCN1Q92616 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.07■□□□□ 0.48
GCN1Q92616 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.07■□□□□ 0.48
GCN1Q92616 AL121829.2-201ENST00000620908 328 ntBASIC18.07■□□□□ 0.48
GCN1Q92616 AC124283.5-201ENST00000624661 1809 ntBASIC18.06■□□□□ 0.48
GCN1Q92616 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
GCN1Q92616 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCN1Q92616 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCN1Q92616 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.06■□□□□ 0.48
GCN1Q92616 COX11P1-201ENST00000489116 835 ntBASIC18.06■□□□□ 0.48
GCN1Q92616 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GCN1Q92616 AC104692.2-201ENST00000603054 253 ntBASIC18.06■□□□□ 0.48
GCN1Q92616 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCN1Q92616 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCN1Q92616 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GCN1Q92616 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.06■□□□□ 0.48
GCN1Q92616 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GCN1Q92616 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.06■□□□□ 0.48
GCN1Q92616 AL138966.2-201ENST00000621997 464 ntBASIC18.06■□□□□ 0.48
GCN1Q92616 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GCN1Q92616 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms