Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM58Q8NG06 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM58Q8NG06 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TRIM58Q8NG06 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 MIR572-201ENST00000384983 95 ntBASIC21.65■■□□□ 1.06
TRIM58Q8NG06 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 AC027682.1-201ENST00000562846 899 ntBASIC21.65■■□□□ 1.06
TRIM58Q8NG06 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 RARRES2P11-201ENST00000635158 484 ntBASIC21.65■■□□□ 1.06
TRIM58Q8NG06 AC125437.2-201ENST00000625180 2167 ntBASIC21.65■■□□□ 1.06
TRIM58Q8NG06 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM58Q8NG06 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM58Q8NG06 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.64■■□□□ 1.06
TRIM58Q8NG06 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM58Q8NG06 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM58Q8NG06 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM58Q8NG06 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM58Q8NG06 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM58Q8NG06 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.64■■□□□ 1.06
TRIM58Q8NG06 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.64■■□□□ 1.06
TRIM58Q8NG06 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 MIR2861-201ENST00000636310 90 ntBASIC21.64■■□□□ 1.05
TRIM58Q8NG06 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM58Q8NG06 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 AC018445.3-201ENST00000624177 1945 ntBASIC21.63■■□□□ 1.05
TRIM58Q8NG06 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.63■■□□□ 1.05
TRIM58Q8NG06 BX323043.1-201ENST00000641006 1765 ntBASIC21.63■■□□□ 1.05
TRIM58Q8NG06 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRIM58Q8NG06 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM58Q8NG06 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM58Q8NG06 AC245052.3-201ENST00000450182 901 ntBASIC21.61■■□□□ 1.05
TRIM58Q8NG06 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms