Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK2A3Q8NEV1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 AC116050.2-201ENST00000612102 1779 ntBASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 AC019069.1-201ENST00000610008 1333 ntBASIC17.72■□□□□ 0.43
CSNK2A3Q8NEV1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 RBM17P2-201ENST00000616397 1405 ntBASIC17.71■□□□□ 0.43
CSNK2A3Q8NEV1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.71■□□□□ 0.42
CSNK2A3Q8NEV1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 GABARAPL3-202ENST00000624044 1851 ntBASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 KRT18P11-201ENST00000435214 1283 ntBASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 AC087623.3-201ENST00000607047 1098 ntBASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 AC007225.1-201ENST00000566331 1836 ntBASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CSNK2A3Q8NEV1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.69■□□□□ 0.42
CSNK2A3Q8NEV1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms