Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 CYP2T1P-201ENST00000432607 1285 ntBASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 AC026185.1-201ENST00000445748 174 ntBASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 AC005181.1-201ENST00000604782 1256 ntBASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRFBP1Q8NEF9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 MCRIP2P1-201ENST00000394346 511 ntBASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 AC092666.2-201ENST00000613287 246 ntBASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SRFBP1Q8NEF9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 AL512625.2-201ENST00000417533 625 ntBASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 CDCA4P2-201ENST00000441182 718 ntBASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
SRFBP1Q8NEF9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 AC087633.2-202ENST00000565166 1439 ntBASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 CYP21A1P-202ENST00000354927 1481 ntBASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.43■□□□□ 0.7
SRFBP1Q8NEF9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 AC133552.2-202ENST00000575694 574 ntBASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRFBP1Q8NEF9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms