Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 AC245052.3-201ENST00000450182 901 ntBASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 AC138907.5-202ENST00000569484 235 ntBASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN22Q8N7P3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 AL020996.1-203ENST00000536896 2307 ntBASIC18.54■□□□□ 0.56
CLDN22Q8N7P3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 PCDHAC2-203ENST00000615316 3011 ntBASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 AC120498.10-201ENST00000621827 505 ntBASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN22Q8N7P3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 YBX1P1-201ENST00000445822 960 ntBASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 CCDC92B-201ENST00000575506 885 ntBASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 TERF1P2-201ENST00000583350 1212 ntBASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 MIR2861-201ENST00000636310 90 ntBASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN22Q8N7P3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN22Q8N7P3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.52■□□□□ 0.55
CLDN22Q8N7P3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CLDN22Q8N7P3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms