Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.33■□□□□ 0.68
ARHGEF39Q8N4T4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.33■□□□□ 0.68
ARHGEF39Q8N4T4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.33■□□□□ 0.68
ARHGEF39Q8N4T4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ARHGEF39Q8N4T4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.33■□□□□ 0.68
ARHGEF39Q8N4T4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.33■□□□□ 0.68
ARHGEF39Q8N4T4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARHGEF39Q8N4T4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ARHGEF39Q8N4T4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ARHGEF39Q8N4T4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 C2orf69P4-201ENST00000565394 541 ntBASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
ARHGEF39Q8N4T4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARHGEF39Q8N4T4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARHGEF39Q8N4T4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 AC007225.1-201ENST00000566331 1836 ntBASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 CD99P1-205ENST00000527459 561 ntBASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.28■□□□□ 0.68
ARHGEF39Q8N4T4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARHGEF39Q8N4T4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms