Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 PNMA6B-201ENST00000538162 1200 ntBASIC22.11■■□□□ 1.13
VPS52Q8N1B4 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VPS52Q8N1B4 AL137060.1-201ENST00000618151 2648 ntBASIC22.1■■□□□ 1.13
VPS52Q8N1B4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
VPS52Q8N1B4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 AC092368.3-202ENST00000574180 1591 ntBASIC22.09■■□□□ 1.13
VPS52Q8N1B4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 AL359736.2-201ENST00000621992 437 ntBASIC22.09■■□□□ 1.13
VPS52Q8N1B4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS52Q8N1B4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 UBE2SP1-201ENST00000450587 669 ntBASIC22.08■■□□□ 1.13
VPS52Q8N1B4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 AC008550.1-201ENST00000511500 884 ntBASIC22.08■■□□□ 1.13
VPS52Q8N1B4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
VPS52Q8N1B4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
VPS52Q8N1B4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.08■■□□□ 1.12
VPS52Q8N1B4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
VPS52Q8N1B4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VPS52Q8N1B4 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 KRT17P3-201ENST00000420566 1262 ntBASIC22.06■■□□□ 1.12
VPS52Q8N1B4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 CYP21A1P-202ENST00000354927 1481 ntBASIC22.06■■□□□ 1.12
VPS52Q8N1B4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS52Q8N1B4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms