Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.89■■□□□ 1.74
COPS6Q7L5N1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
COPS6Q7L5N1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.89■■□□□ 1.74
COPS6Q7L5N1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
COPS6Q7L5N1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.89■■□□□ 1.74
COPS6Q7L5N1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.89■■□□□ 1.74
COPS6Q7L5N1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.89■■□□□ 1.74
COPS6Q7L5N1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.89■■□□□ 1.74
COPS6Q7L5N1 AP006294.2-201ENST00000641667 209 ntBASIC25.89■■□□□ 1.74
COPS6Q7L5N1 FEM1AP4-201ENST00000443167 1987 ntBASIC25.89■■□□□ 1.73
COPS6Q7L5N1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COPS6Q7L5N1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
COPS6Q7L5N1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 POM121L13P-201ENST00000422362 380 ntBASIC25.88■■□□□ 1.73
COPS6Q7L5N1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 RPPH1-201ENST00000516869 333 ntBASIC25.88■■□□□ 1.73
COPS6Q7L5N1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 AC069544.1-201ENST00000609399 999 ntBASIC25.88■■□□□ 1.73
COPS6Q7L5N1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 AC006557.6-201ENST00000623071 864 ntBASIC25.88■■□□□ 1.73
COPS6Q7L5N1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COPS6Q7L5N1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 AC005829.2-201ENST00000571422 1056 ntBASIC25.87■■□□□ 1.73
COPS6Q7L5N1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 AC121338.2-201ENST00000622535 1744 ntBASIC25.87■■□□□ 1.73
COPS6Q7L5N1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COPS6Q7L5N1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 C1QBPP2-201ENST00000528754 825 ntBASIC25.86■■□□□ 1.73
COPS6Q7L5N1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 MIR2861-201ENST00000636310 90 ntBASIC25.86■■□□□ 1.73
COPS6Q7L5N1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COPS6Q7L5N1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COPS6Q7L5N1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
COPS6Q7L5N1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms