Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 RARRES2P11-201ENST00000635158 484 ntBASIC20.61■□□□□ 0.89
PACS1Q6VY07 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS1Q6VY07 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS1Q6VY07 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS1Q6VY07 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.6■□□□□ 0.89
PACS1Q6VY07 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS1Q6VY07 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
PACS1Q6VY07 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS1Q6VY07 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS1Q6VY07 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
PACS1Q6VY07 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.6■□□□□ 0.89
PACS1Q6VY07 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.6■□□□□ 0.89
PACS1Q6VY07 KRT18P11-201ENST00000435214 1283 ntBASIC20.6■□□□□ 0.89
PACS1Q6VY07 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.6■□□□□ 0.89
PACS1Q6VY07 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PACS1Q6VY07 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.6■□□□□ 0.89
PACS1Q6VY07 MYCNOS-205ENST00000641950 531 ntBASIC20.6■□□□□ 0.89
PACS1Q6VY07 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.6■□□□□ 0.89
PACS1Q6VY07 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS1Q6VY07 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS1Q6VY07 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PACS1Q6VY07 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 AC245052.3-201ENST00000450182 901 ntBASIC20.59■□□□□ 0.89
PACS1Q6VY07 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 AC137761.2-201ENST00000561729 223 ntBASIC20.59■□□□□ 0.89
PACS1Q6VY07 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 AC145350.3-201ENST00000569033 163 ntBASIC20.59■□□□□ 0.89
PACS1Q6VY07 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PACS1Q6VY07 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS1Q6VY07 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS1Q6VY07 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS1Q6VY07 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PACS1Q6VY07 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS1Q6VY07 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS1Q6VY07 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PACS1Q6VY07 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PACS1Q6VY07 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 AC243732.1-201ENST00000612648 864 ntBASIC20.58■□□□□ 0.89
PACS1Q6VY07 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.58■□□□□ 0.89
PACS1Q6VY07 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PACS1Q6VY07 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PACS1Q6VY07 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.58■□□□□ 0.88
PACS1Q6VY07 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PACS1Q6VY07 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PACS1Q6VY07 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.58■□□□□ 0.88
PACS1Q6VY07 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.58■□□□□ 0.88
PACS1Q6VY07 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PACS1Q6VY07 AC006015.1-201ENST00000429970 570 ntBASIC20.57■□□□□ 0.88
PACS1Q6VY07 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PACS1Q6VY07 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms