Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 MIR935-201ENST00000401179 91 ntBASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 MYCNOS-205ENST00000641950 531 ntBASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 RBM17P2-201ENST00000616397 1405 ntBASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 AC011484.1-201ENST00000377652 1995 ntBASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 FEM1AP1-201ENST00000431297 1995 ntBASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN4Q6PJG9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 AC137761.2-201ENST00000561729 223 ntBASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 AC145350.3-201ENST00000569033 163 ntBASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 AC243732.1-201ENST00000612648 864 ntBASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 AIRN-201ENST00000601203 4374 ntBASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN4Q6PJG9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRFN4Q6PJG9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.28■□□□□ 0.52
LRFN4Q6PJG9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms