Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 AP003071.4-201ENST00000562276 1284 ntBASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 AL353708.3-201ENST00000610272 989 ntBASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CNKSR3Q6P9H4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 AL121829.2-201ENST00000620908 328 ntBASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
CNKSR3Q6P9H4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 AL355355.2-201ENST00000442321 338 ntBASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 CD177P1-201ENST00000606252 935 ntBASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CNKSR3Q6P9H4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 KRT16P5-201ENST00000455284 522 ntBASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 AF186192.3-201ENST00000583427 947 ntBASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CNKSR3Q6P9H4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 HTR7P1-201ENST00000538670 1336 ntBASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 AL353807.1-201ENST00000427475 662 ntBASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
CNKSR3Q6P9H4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 MMP23A-201ENST00000234610 1017 ntBASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 TMPOP1-202ENST00000424642 1267 ntBASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.08■■□□□ 1.13
CNKSR3Q6P9H4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms