Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.58■□□□□ 0.56
TMEM53Q6P2H8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.57■□□□□ 0.56
TMEM53Q6P2H8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMEM53Q6P2H8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 AC010542.4-201ENST00000563151 1910 ntBASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 AC005332.8-201ENST00000622750 2735 ntBASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 SMG8-203ENST00000578922 2178 ntBASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 AC003102.1-202ENST00000563394 1796 ntBASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 AC026471.6-201ENST00000622954 1905 ntBASIC18.55■□□□□ 0.56
TMEM53Q6P2H8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 KRT18P14-201ENST00000534205 1250 ntBASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 CCDC92B-201ENST00000575506 885 ntBASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 AC020916.1-201ENST00000587762 1774 ntBASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TMEM53Q6P2H8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 NEFHP1-201ENST00000412845 2629 ntBASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 TERF1P2-201ENST00000583350 1212 ntBASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TMEM53Q6P2H8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms