Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCRAQ6ISU1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 AC092053.2-201ENST00000640557 1818 ntBASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCRAQ6ISU1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 LIN28AP1-201ENST00000429574 405 ntBASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 AC068473.5-201ENST00000616428 2072 ntBASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCRAQ6ISU1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 AC010203.1-204ENST00000548782 407 ntBASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 AC091076.1-201ENST00000610741 619 ntBASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 AL356652.1-201ENST00000615962 565 ntBASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.19■□□□□ 0.98
PTCRAQ6ISU1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 ATP5G1P1-201ENST00000448724 379 ntBASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 AC006011.2-201ENST00000621313 1158 ntBASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 AL358472.4-201ENST00000633140 710 ntBASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.18■□□□□ 0.98
PTCRAQ6ISU1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCRAQ6ISU1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms