Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC142086.2-201ENST00000569753 217 ntBASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
TTC39BQ5VTQ0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 AL355802.2-201ENST00000402069 882 ntBASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TTC39BQ5VTQ0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC39BQ5VTQ0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 LINC01006-201ENST00000333319 2292 ntBASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 FEM1AP1-201ENST00000431297 1995 ntBASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
TTC39BQ5VTQ0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
TTC39BQ5VTQ0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
TTC39BQ5VTQ0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 MCRIP2P1-201ENST00000394346 511 ntBASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 MIPEPP3-201ENST00000412105 444 ntBASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 MIR4758-201ENST00000577688 71 ntBASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TTC39BQ5VTQ0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms