Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TERF1P5-201ENST00000477545 1207 ntBASIC21.23■□□□□ 0.99
LRRC38Q5VT99 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 AC010536.3-201ENST00000620306 533 ntBASIC21.23■□□□□ 0.99
LRRC38Q5VT99 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 AL162412.1-201ENST00000567129 965 ntBASIC21.22■□□□□ 0.99
LRRC38Q5VT99 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC38Q5VT99 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 AL591742.1-201ENST00000604433 565 ntBASIC21.21■□□□□ 0.99
LRRC38Q5VT99 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC38Q5VT99 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 KRT18P11-201ENST00000435214 1283 ntBASIC21.2■□□□□ 0.98
LRRC38Q5VT99 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 AC087623.3-201ENST00000607047 1098 ntBASIC21.2■□□□□ 0.98
LRRC38Q5VT99 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC38Q5VT99 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.19■□□□□ 0.98
LRRC38Q5VT99 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 AC007322.4-201ENST00000509611 723 ntBASIC21.19■□□□□ 0.98
LRRC38Q5VT99 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC38Q5VT99 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 PGM5P4-201ENST00000421970 445 ntBASIC21.18■□□□□ 0.98
LRRC38Q5VT99 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC38Q5VT99 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms