Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 AP002982.1-201ENST00000492365 877 ntBASIC20.05■□□□□ 0.8
RIF1Q5UIP0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 AC124283.5-201ENST00000624661 1809 ntBASIC20.05■□□□□ 0.8
RIF1Q5UIP0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 FDX1P1-201ENST00000449115 551 ntBASIC20.04■□□□□ 0.8
RIF1Q5UIP0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 AL121956.5-201ENST00000625261 221 ntBASIC20.04■□□□□ 0.8
RIF1Q5UIP0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.04■□□□□ 0.8
RIF1Q5UIP0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 ECEL1P2-202ENST00000465689 757 ntBASIC20.03■□□□□ 0.8
RIF1Q5UIP0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIF1Q5UIP0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 KRT18P16-201ENST00000510337 1294 ntBASIC20.02■□□□□ 0.8
RIF1Q5UIP0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.02■□□□□ 0.8
RIF1Q5UIP0 FAM87A-204ENST00000613235 858 ntBASIC20.02■□□□□ 0.8
RIF1Q5UIP0 AL121829.2-201ENST00000620908 328 ntBASIC20.02■□□□□ 0.8
RIF1Q5UIP0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.02■□□□□ 0.79
RIF1Q5UIP0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RIF1Q5UIP0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RIF1Q5UIP0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 AP000347.1-202ENST00000435868 847 ntBASIC20.01■□□□□ 0.79
RIF1Q5UIP0 YBX1P2-201ENST00000489612 999 ntBASIC20.01■□□□□ 0.79
RIF1Q5UIP0 SLC25A1P4-201ENST00000567977 778 ntBASIC20.01■□□□□ 0.79
RIF1Q5UIP0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 AC117947.1-201ENST00000427448 529 ntBASIC20.01■□□□□ 0.79
RIF1Q5UIP0 RN7SL510P-201ENST00000581311 263 ntBASIC20.01■□□□□ 0.79
RIF1Q5UIP0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIF1Q5UIP0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIF1Q5UIP0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIF1Q5UIP0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20■□□□□ 0.79
RIF1Q5UIP0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20■□□□□ 0.79
RIF1Q5UIP0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20■□□□□ 0.79
RIF1Q5UIP0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20■□□□□ 0.79
RIF1Q5UIP0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIF1Q5UIP0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RIF1Q5UIP0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIF1Q5UIP0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIF1Q5UIP0 PVRIG2P-201ENST00000435460 978 ntBASIC20■□□□□ 0.79
RIF1Q5UIP0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
RIF1Q5UIP0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms