Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ALFQ53S48 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ALFQ53S48 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.01■□□□□ 0.95
ALFQ53S48 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ALFQ53S48 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.01■□□□□ 0.95
ALFQ53S48 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.01■□□□□ 0.95
ALFQ53S48 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.01■□□□□ 0.95
ALFQ53S48 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.01■□□□□ 0.95
ALFQ53S48 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
ALFQ53S48 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.01■□□□□ 0.95
ALFQ53S48 AL121603.2-201ENST00000557373 2117 ntBASIC21.01■□□□□ 0.95
ALFQ53S48 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ALFQ53S48 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21■□□□□ 0.95
ALFQ53S48 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21■□□□□ 0.95
ALFQ53S48 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
ALFQ53S48 AL589743.5-201ENST00000616611 1050 ntBASIC21■□□□□ 0.95
ALFQ53S48 AC105020.6-201ENST00000621523 1217 ntBASIC21■□□□□ 0.95
ALFQ53S48 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21■□□□□ 0.95
ALFQ53S48 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ALFQ53S48 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21■□□□□ 0.95
ALFQ53S48 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALFQ53S48 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ALFQ53S48 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.99■□□□□ 0.95
ALFQ53S48 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.99■□□□□ 0.95
ALFQ53S48 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ALFQ53S48 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALFQ53S48 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ALFQ53S48 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALFQ53S48 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ALFQ53S48 DUSP5P2-201ENST00000426873 1033 ntBASIC20.99■□□□□ 0.95
ALFQ53S48 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.99■□□□□ 0.95
ALFQ53S48 AC073210.2-201ENST00000430369 194 ntBASIC20.99■□□□□ 0.95
ALFQ53S48 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALFQ53S48 AL356652.1-201ENST00000615962 565 ntBASIC20.99■□□□□ 0.95
ALFQ53S48 AC133041.1-202ENST00000642053 222 ntBASIC20.99■□□□□ 0.95
ALFQ53S48 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALFQ53S48 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.99■□□□□ 0.95
ALFQ53S48 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALFQ53S48 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALFQ53S48 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.99■□□□□ 0.95
ALFQ53S48 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALFQ53S48 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALFQ53S48 FP700111.2-201ENST00000619190 1892 ntBASIC20.98■□□□□ 0.95
ALFQ53S48 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ALFQ53S48 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.98■□□□□ 0.95
ALFQ53S48 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.98■□□□□ 0.95
ALFQ53S48 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
ALFQ53S48 AC091874.3-201ENST00000512672 1195 ntBASIC20.98■□□□□ 0.95
ALFQ53S48 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.98■□□□□ 0.95
ALFQ53S48 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALFQ53S48 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.98■□□□□ 0.95
ALFQ53S48 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ALFQ53S48 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALFQ53S48 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ALFQ53S48 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALFQ53S48 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALFQ53S48 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALFQ53S48 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALFQ53S48 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALFQ53S48 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.97■□□□□ 0.95
ALFQ53S48 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.97■□□□□ 0.95
ALFQ53S48 MYC-209ENST00000641252 345 ntBASIC20.97■□□□□ 0.95
ALFQ53S48 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ALFQ53S48 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALFQ53S48 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALFQ53S48 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALFQ53S48 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALFQ53S48 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALFQ53S48 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.96■□□□□ 0.95
ALFQ53S48 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.96■□□□□ 0.95
ALFQ53S48 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.96■□□□□ 0.95
ALFQ53S48 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALFQ53S48 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.96■□□□□ 0.95
ALFQ53S48 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.96■□□□□ 0.95
ALFQ53S48 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ALFQ53S48 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.96■□□□□ 0.95
ALFQ53S48 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.96■□□□□ 0.95
ALFQ53S48 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms