Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC144BQ3MJ40 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 AC006058.3-201ENST00000606217 1069 ntBASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC144BQ3MJ40 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 LSM12P1-201ENST00000411836 588 ntBASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 GCSHP5-201ENST00000443090 522 ntBASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCDC144BQ3MJ40 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144BQ3MJ40 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144BQ3MJ40 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CCDC144BQ3MJ40 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144BQ3MJ40 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144BQ3MJ40 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC144BQ3MJ40 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.64■■□□□ 1.38
CCDC144BQ3MJ40 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC144BQ3MJ40 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 AC128676.1-201ENST00000454392 318 ntBASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC144BQ3MJ40 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 AC091799.1-201ENST00000422823 811 ntBASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 AL355472.2-201ENST00000422958 438 ntBASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 UNC93B5-201ENST00000530315 699 ntBASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC144BQ3MJ40 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.61■■□□□ 1.37
CCDC144BQ3MJ40 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms