Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 POM121L13P-201ENST00000422362 380 ntBASIC24.62■■□□□ 1.53
PDS5AQ29RF7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 AC069544.1-201ENST00000609399 999 ntBASIC24.62■■□□□ 1.53
PDS5AQ29RF7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 KRT17P3-201ENST00000420566 1262 ntBASIC24.61■■□□□ 1.53
PDS5AQ29RF7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.61■■□□□ 1.53
PDS5AQ29RF7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDS5AQ29RF7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 AC142381.4-202ENST00000563973 229 ntBASIC24.59■■□□□ 1.53
PDS5AQ29RF7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDS5AQ29RF7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.58■■□□□ 1.53
PDS5AQ29RF7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDS5AQ29RF7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PDS5AQ29RF7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDS5AQ29RF7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PDS5AQ29RF7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PDS5AQ29RF7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
PDS5AQ29RF7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PDS5AQ29RF7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 AC023632.3-201ENST00000521633 145 ntBASIC24.58■■□□□ 1.52
PDS5AQ29RF7 AC233263.1-201ENST00000578059 224 ntBASIC24.58■■□□□ 1.52
PDS5AQ29RF7 RN7SL471P-201ENST00000580476 299 ntBASIC24.58■■□□□ 1.52
PDS5AQ29RF7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PDS5AQ29RF7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.57■■□□□ 1.52
PDS5AQ29RF7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.57■■□□□ 1.52
PDS5AQ29RF7 AC093827.2-201ENST00000512654 315 ntBASIC24.57■■□□□ 1.52
PDS5AQ29RF7 AL359736.2-201ENST00000621992 437 ntBASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms