Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKL1Q00532 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKL1Q00532 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL1Q00532 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDKL1Q00532 KRT18P11-201ENST00000435214 1283 ntBASIC20.05■□□□□ 0.8
CDKL1Q00532 KRT18P5-201ENST00000436075 1291 ntBASIC20.05■□□□□ 0.8
CDKL1Q00532 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.05■□□□□ 0.8
CDKL1Q00532 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.05■□□□□ 0.8
CDKL1Q00532 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL1Q00532 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.05■□□□□ 0.8
CDKL1Q00532 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL1Q00532 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDKL1Q00532 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDKL1Q00532 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL1Q00532 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.05■□□□□ 0.8
CDKL1Q00532 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKL1Q00532 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKL1Q00532 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.04■□□□□ 0.8
CDKL1Q00532 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKL1Q00532 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKL1Q00532 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDKL1Q00532 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CDKL1Q00532 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.04■□□□□ 0.8
CDKL1Q00532 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.04■□□□□ 0.8
CDKL1Q00532 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.04■□□□□ 0.8
CDKL1Q00532 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKL1Q00532 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CDKL1Q00532 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.04■□□□□ 0.8
CDKL1Q00532 GABARAPL3-202ENST00000624044 1851 ntBASIC20.04■□□□□ 0.8
CDKL1Q00532 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDKL1Q00532 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKL1Q00532 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDKL1Q00532 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDKL1Q00532 AP005212.1-201ENST00000581547 1997 ntBASIC20.03■□□□□ 0.8
CDKL1Q00532 AFG3L1P-217ENST00000557444 2447 ntBASIC20.03■□□□□ 0.8
CDKL1Q00532 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.03■□□□□ 0.8
CDKL1Q00532 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.03■□□□□ 0.8
CDKL1Q00532 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.03■□□□□ 0.8
CDKL1Q00532 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.03■□□□□ 0.8
CDKL1Q00532 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.03■□□□□ 0.8
CDKL1Q00532 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKL1Q00532 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDKL1Q00532 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL1Q00532 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL1Q00532 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL1Q00532 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.02■□□□□ 0.8
CDKL1Q00532 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.02■□□□□ 0.8
CDKL1Q00532 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL1Q00532 AC007322.3-201ENST00000426526 701 ntBASIC20.02■□□□□ 0.8
CDKL1Q00532 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL1Q00532 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CDKL1Q00532 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL1Q00532 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.02■□□□□ 0.8
CDKL1Q00532 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKL1Q00532 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.02■□□□□ 0.79
CDKL1Q00532 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDKL1Q00532 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDKL1Q00532 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CDKL1Q00532 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 FP700111.2-201ENST00000619190 1892 ntBASIC20.01■□□□□ 0.79
CDKL1Q00532 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKL1Q00532 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CDKL1Q00532 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKL1Q00532 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.01■□□□□ 0.79
CDKL1Q00532 AC010536.3-201ENST00000620306 533 ntBASIC20.01■□□□□ 0.79
CDKL1Q00532 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.01■□□□□ 0.79
CDKL1Q00532 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDKL1Q00532 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDKL1Q00532 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20■□□□□ 0.79
CDKL1Q00532 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDKL1Q00532 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CDKL1Q00532 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms