Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.26■□□□□ 0.51
H3F3AP84243 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H3F3AP84243 PGM5P4-201ENST00000421970 445 ntBASIC18.26■□□□□ 0.51
H3F3AP84243 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.26■□□□□ 0.51
H3F3AP84243 AC105036.2-201ENST00000569468 176 ntBASIC18.26■□□□□ 0.51
H3F3AP84243 CYP2T3P-201ENST00000601990 817 ntBASIC18.26■□□□□ 0.51
H3F3AP84243 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.26■□□□□ 0.51
H3F3AP84243 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.26■□□□□ 0.51
H3F3AP84243 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
H3F3AP84243 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.26■□□□□ 0.51
H3F3AP84243 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H3F3AP84243 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
H3F3AP84243 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.26■□□□□ 0.51
H3F3AP84243 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
H3F3AP84243 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
H3F3AP84243 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.25■□□□□ 0.51
H3F3AP84243 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.25■□□□□ 0.51
H3F3AP84243 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.25■□□□□ 0.51
H3F3AP84243 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.25■□□□□ 0.51
H3F3AP84243 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.25■□□□□ 0.51
H3F3AP84243 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.25■□□□□ 0.51
H3F3AP84243 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
H3F3AP84243 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.25■□□□□ 0.51
H3F3AP84243 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.25■□□□□ 0.51
H3F3AP84243 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
H3F3AP84243 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H3F3AP84243 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 KRT8P36-201ENST00000489121 1440 ntBASIC18.24■□□□□ 0.51
H3F3AP84243 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.24■□□□□ 0.51
H3F3AP84243 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.24■□□□□ 0.51
H3F3AP84243 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 KRT18P68-201ENST00000392293 1000 ntBASIC18.24■□□□□ 0.51
H3F3AP84243 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
H3F3AP84243 GUSBP6-202ENST00000438529 1198 ntBASIC18.24■□□□□ 0.51
H3F3AP84243 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.24■□□□□ 0.51
H3F3AP84243 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.24■□□□□ 0.51
H3F3AP84243 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.24■□□□□ 0.51
H3F3AP84243 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.24■□□□□ 0.51
H3F3AP84243 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H3F3AP84243 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
H3F3AP84243 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.24■□□□□ 0.51
H3F3AP84243 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H3F3AP84243 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H3F3AP84243 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
H3F3AP84243 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H3F3AP84243 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.23■□□□□ 0.51
H3F3AP84243 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
H3F3AP84243 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.23■□□□□ 0.51
H3F3AP84243 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H3F3AP84243 GPX1P1-201ENST00000388829 606 ntBASIC18.23■□□□□ 0.51
H3F3AP84243 TSPY6P-201ENST00000448518 926 ntBASIC18.23■□□□□ 0.51
H3F3AP84243 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H3F3AP84243 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.23■□□□□ 0.51
H3F3AP84243 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.23■□□□□ 0.51
H3F3AP84243 AL356652.1-201ENST00000615962 565 ntBASIC18.23■□□□□ 0.51
H3F3AP84243 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
H3F3AP84243 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
H3F3AP84243 MKRN4P-201ENST00000444706 1521 ntBASIC18.23■□□□□ 0.51
H3F3AP84243 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
H3F3AP84243 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
H3F3AP84243 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
H3F3AP84243 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
H3F3AP84243 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
H3F3AP84243 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
H3F3AP84243 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H3F3AP84243 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.22■□□□□ 0.51
H3F3AP84243 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.22■□□□□ 0.51
H3F3AP84243 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms